Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm4943-201ENSMUST00000132879 424 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm12791-201ENSMUST00000120788 655 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm17541-201ENSMUST00000080062 525 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.05□□□□□ -0.64
Chd8Q09XV5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd8Q09XV5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm11509-201ENSMUST00000117358 325 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm12418-201ENSMUST00000118116 942 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm26174-201ENSMUST00000158415 219 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm16228-201ENSMUST00000162286 809 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.04□□□□□ -0.64
Chd8Q09XV5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd8Q09XV5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms