Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SgcbP82349 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SgcbP82349 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Gm13350-201ENSMUST00000120519 479 ntBASIC11.09□□□□□ -0.63
SgcbP82349 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.09□□□□□ -0.63
SgcbP82349 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.09□□□□□ -0.63
SgcbP82349 Gm43758-201ENSMUST00000199500 367 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Gm21769-201ENSMUST00000211922 111 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SgcbP82349 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SgcbP82349 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SgcbP82349 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SgcbP82349 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.09□□□□□ -0.63
SgcbP82349 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
SgcbP82349 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
SgcbP82349 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SgcbP82349 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Gm11531-201ENSMUST00000117614 555 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcbP82349 Gm25043-201ENSMUST00000158604 212 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcbP82349 Gm5950-201ENSMUST00000213337 772 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.08□□□□□ -0.64
SgcbP82349 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.08□□□□□ -0.64
SgcbP82349 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcbP82349 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcbP82349 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms