Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm29100-201ENSMUST00000187564 4410 ntBASIC8.82□□□□□ -1
Rpl39P62892 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.82□□□□□ -1
Rpl39P62892 Gm14704-201ENSMUST00000120300 874 ntBASIC8.82□□□□□ -1
Rpl39P62892 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.82□□□□□ -1
Rpl39P62892 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC8.82□□□□□ -1
Rpl39P62892 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.82□□□□□ -1
Rpl39P62892 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.82□□□□□ -1
Rpl39P62892 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.82□□□□□ -1
Rpl39P62892 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.82□□□□□ -1
Rpl39P62892 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gm44086-201ENSMUST00000203251 2349 ntBASIC8.82□□□□□ -1
Rpl39P62892 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl39P62892 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC8.82□□□□□ -1
Rpl39P62892 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 AC164426.2-201ENSMUST00000225993 2492 ntBASIC8.81□□□□□ -1
Rpl39P62892 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.81□□□□□ -1
Rpl39P62892 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Rpl39P62892 Gm5687-201ENSMUST00000118252 640 ntBASIC8.81□□□□□ -1
Rpl39P62892 Gm27306-201ENSMUST00000183970 107 ntBASIC8.81□□□□□ -1
Rpl39P62892 Gm27838-201ENSMUST00000184829 128 ntBASIC8.81□□□□□ -1
Rpl39P62892 Gm44397-201ENSMUST00000195950 113 ntBASIC8.81□□□□□ -1
Rpl39P62892 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.81□□□□□ -1
Rpl39P62892 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.81□□□□□ -1
Rpl39P62892 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Hist1h2al-201ENSMUST00000091708 339 ntBASIC8.81□□□□□ -1
Rpl39P62892 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl39P62892 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl39P62892 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.8□□□□□ -1
Rpl39P62892 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms