Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Gabra1P62812 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gabra1P62812 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gabra1P62812 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.43□□□□□ -0.74
Gabra1P62812 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.43□□□□□ -0.74
Gabra1P62812 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm14701-201ENSMUST00000117156 348 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Gm13453-201ENSMUST00000118708 357 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm38294-201ENSMUST00000192831 381 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Gabra1P62812 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.43□□□□□ -0.74
Gabra1P62812 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.43□□□□□ -0.74
Gabra1P62812 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.43□□□□□ -0.74
Gabra1P62812 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Gabra1P62812 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.43□□□□□ -0.74
Gabra1P62812 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gabra1P62812 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.43□□□□□ -0.74
Gabra1P62812 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.43□□□□□ -0.74
Gabra1P62812 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gabra1P62812 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
Gabra1P62812 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.42□□□□□ -0.74
Gabra1P62812 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.42□□□□□ -0.74
Gabra1P62812 Gm17837-201ENSMUST00000186435 985 ntBASIC10.42□□□□□ -0.74
Gabra1P62812 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.42□□□□□ -0.74
Gabra1P62812 Gm9063-201ENSMUST00000223299 582 ntBASIC10.42□□□□□ -0.74
Gabra1P62812 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.42□□□□□ -0.74
Gabra1P62812 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms