Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Mir1895-201ENSMUST00000122615 79 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.25□□□□□ -0.61
Lsm3P62311 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Lsm3P62311 Gm43703-201ENSMUST00000200523 763 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Gm6458-201ENSMUST00000211573 635 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.25□□□□□ -0.61
Lsm3P62311 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Gm26315-201ENSMUST00000083890 321 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Gm10175-201ENSMUST00000086013 645 ntBASIC11.25□□□□□ -0.61
Lsm3P62311 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lsm3P62311 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm3P62311 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Lsm3P62311 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm3436-201ENSMUST00000179930 840 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm10576-201ENSMUST00000191927 825 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Gm43474-201ENSMUST00000196415 774 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Gm44335-201ENSMUST00000196879 141 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Gm44297-201ENSMUST00000198304 141 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Gm44346-201ENSMUST00000198851 141 ntBASIC11.24□□□□□ -0.61
Lsm3P62311 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Lsm3P62311 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Lsm3P62311 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Lsm3P62311 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm3P62311 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Lsm3P62311 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm3P62311 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm3P62311 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.23□□□□□ -0.61
Lsm3P62311 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.23□□□□□ -0.61
Lsm3P62311 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm3P62311 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm3P62311 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lsm3P62311 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lsm3P62311 Gm22065-201ENSMUST00000103753 110 ntBASIC11.23□□□□□ -0.61
Lsm3P62311 Gm22066-201ENSMUST00000103761 110 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms