Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a1P61620 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sec61a1P61620 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Sec61a1P61620 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a1P61620 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a1P61620 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.95□□□□□ -0.66
Sec61a1P61620 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a1P61620 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.94□□□□□ -0.66
Sec61a1P61620 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.94□□□□□ -0.66
Sec61a1P61620 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm12742-201ENSMUST00000117326 410 ntBASIC10.94□□□□□ -0.66
Sec61a1P61620 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a1P61620 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a1P61620 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sec61a1P61620 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 322.8 ms