Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.39□□□□□ -0.27
Nub1P54729 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nub1P54729 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nub1P54729 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.39□□□□□ -0.27
Nub1P54729 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nub1P54729 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nub1P54729 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nub1P54729 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.39□□□□□ -0.27
Nub1P54729 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nub1P54729 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Gm15370-201ENSMUST00000117158 253 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Gm13342-201ENSMUST00000121055 207 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.38□□□□□ -0.27
Nub1P54729 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Nub1P54729 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.38□□□□□ -0.27
Nub1P54729 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Nub1P54729 Mir8109-201ENSMUST00000184375 117 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Gm18935-201ENSMUST00000212692 664 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nub1P54729 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nub1P54729 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.38□□□□□ -0.27
Nub1P54729 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm10434-201ENSMUST00000101158 471 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Gm13297-201ENSMUST00000120205 934 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Nub1P54729 Gm2546-201ENSMUST00000182630 991 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.37□□□□□ -0.27
Nub1P54729 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm39404-201ENSMUST00000216350 313 ntBASIC13.37□□□□□ -0.27
Nub1P54729 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.37□□□□□ -0.27
Nub1P54729 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Morn2-202ENSMUST00000227729 656 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nub1P54729 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.37□□□□□ -0.27
Nub1P54729 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nub1P54729 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Nub1P54729 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.37□□□□□ -0.27
Nub1P54729 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nub1P54729 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.37□□□□□ -0.27
Nub1P54729 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms