Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Fdft1P53798 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Gm12384-201ENSMUST00000119228 919 ntBASIC12.4□□□□□ -0.42
Fdft1P53798 Gm15824-201ENSMUST00000119516 955 ntBASIC12.4□□□□□ -0.42
Fdft1P53798 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.4□□□□□ -0.42
Fdft1P53798 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Gm44124-201ENSMUST00000204159 472 ntBASIC12.4□□□□□ -0.42
Fdft1P53798 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.4□□□□□ -0.42
Fdft1P53798 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.4□□□□□ -0.42
Fdft1P53798 Gm24526-201ENSMUST00000082921 158 ntBASIC12.4□□□□□ -0.42
Fdft1P53798 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.4□□□□□ -0.42
Fdft1P53798 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fdft1P53798 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fdft1P53798 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fdft1P53798 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Fdft1P53798 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.39□□□□□ -0.43
Fdft1P53798 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.39□□□□□ -0.43
Fdft1P53798 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Gm27731-201ENSMUST00000185192 107 ntBASIC12.39□□□□□ -0.43
Fdft1P53798 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Fdft1P53798 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Fdft1P53798 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Fdft1P53798 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fdft1P53798 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Cog3-203ENSMUST00000227473 4197 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Fdft1P53798 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm12502-201ENSMUST00000120197 444 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Fdft1P53798 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm18187-201ENSMUST00000196476 984 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.38□□□□□ -0.43
Fdft1P53798 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Fdft1P53798 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.38□□□□□ -0.43
Fdft1P53798 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Fdft1P53798 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms