Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Shmt1P50431 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shmt1P50431 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shmt1P50431 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.1□□□□□ -0.31
Shmt1P50431 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shmt1P50431 Gm12015-201ENSMUST00000117065 843 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Shmt1P50431 Mir5132-201ENSMUST00000175166 71 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Gm5363-201ENSMUST00000211927 938 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.1□□□□□ -0.31
Shmt1P50431 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.1□□□□□ -0.31
Shmt1P50431 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.1□□□□□ -0.31
Shmt1P50431 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shmt1P50431 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Gm24934-201ENSMUST00000103764 111 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Gm14644-201ENSMUST00000116671 647 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.09□□□□□ -0.31
Shmt1P50431 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shmt1P50431 Mir7070-201ENSMUST00000183657 86 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Gm19994-201ENSMUST00000217086 586 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shmt1P50431 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.09□□□□□ -0.31
Shmt1P50431 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shmt1P50431 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Shmt1P50431 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shmt1P50431 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shmt1P50431 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shmt1P50431 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shmt1P50431 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.08□□□□□ -0.32
Shmt1P50431 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms