Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx2P48379 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx2P48379 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rfx2P48379 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 Gm38317-201ENSMUST00000195564 343 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.02□□□□□ -0.33
Rfx2P48379 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfx2P48379 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfx2P48379 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.02□□□□□ -0.33
Rfx2P48379 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfx2P48379 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfx2P48379 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfx2P48379 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rfx2P48379 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm25214-201ENSMUST00000104573 129 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Gm14017-201ENSMUST00000121934 386 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.01□□□□□ -0.33
Rfx2P48379 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Rfx2P48379 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Gm18212-201ENSMUST00000211678 889 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.01□□□□□ -0.33
Rfx2P48379 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Rfx2P48379 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfx2P48379 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rfx2P48379 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rfx2P48379 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rfx2P48379 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13□□□□□ -0.33
Rfx2P48379 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13□□□□□ -0.33
Rfx2P48379 Gm13875-201ENSMUST00000120162 282 ntBASIC13□□□□□ -0.33
Rfx2P48379 Gm12997-201ENSMUST00000120207 640 ntBASIC13□□□□□ -0.33
Rfx2P48379 Gm13665-201ENSMUST00000120830 528 ntBASIC13□□□□□ -0.33
Rfx2P48379 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13□□□□□ -0.33
Rfx2P48379 Rn7s1-201ENSMUST00000174924 300 ntBASIC13□□□□□ -0.33
Rfx2P48379 Rn7s2-201ENSMUST00000175032 300 ntBASIC13□□□□□ -0.33
Rfx2P48379 Gm26461-201ENSMUST00000175064 290 ntBASIC13□□□□□ -0.33
Rfx2P48379 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Gm18827-201ENSMUST00000188341 790 ntBASIC13□□□□□ -0.33
Rfx2P48379 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13□□□□□ -0.33
Rfx2P48379 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rfx2P48379 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rfx2P48379 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms