Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Gm37042-201ENSMUST00000193816 581 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Gm8099-201ENSMUST00000200510 742 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 Gm42599-201ENSMUST00000201308 469 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rfx1P48377 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rfx1P48377 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rfx1P48377 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Rfx1P48377 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx1P48377 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.79□□□□□ -0.04
Rfx1P48377 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rfx1P48377 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx1P48377 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx1P48377 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.78□□□□□ -0.04
Rfx1P48377 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rfx1P48377 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm15920-201ENSMUST00000118998 402 ntBASIC14.78□□□□□ -0.04
Rfx1P48377 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.78□□□□□ -0.04
Rfx1P48377 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm37922-201ENSMUST00000195596 455 ntBASIC14.78□□□□□ -0.04
Rfx1P48377 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx1P48377 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx1P48377 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx1P48377 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Rfx1P48377 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rfx1P48377 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.77□□□□□ -0.04
Rfx1P48377 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Rfx1P48377 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.77□□□□□ -0.05
Rfx1P48377 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Gm20614-201ENSMUST00000177106 632 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Rfx1P48377 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfx1P48377 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfx1P48377 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfx1P48377 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx1P48377 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.77□□□□□ -0.05
Rfx1P48377 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms