Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Gm18018-201ENSMUST00000198273 408 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.24□□□□□ -0.77
Hist1h1aP43275 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hist1h1aP43275 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm14921-201ENSMUST00000118643 908 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm13123-201ENSMUST00000122173 492 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Auts2-212ENSMUST00000178555 309 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm37922-201ENSMUST00000195596 455 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm26035-201ENSMUST00000083065 308 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.23□□□□□ -0.77
Hist1h1aP43275 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hist1h1aP43275 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms