Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-2P42586 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm12241-201ENSMUST00000118330 726 ntBASIC11.35□□□□□ -0.59
Nkx2-2P42586 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.35□□□□□ -0.59
Nkx2-2P42586 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.35□□□□□ -0.59
Nkx2-2P42586 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-2P42586 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm11222-201ENSMUST00000119005 738 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm26956-201ENSMUST00000182176 986 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm43630-201ENSMUST00000201550 776 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.34□□□□□ -0.59
Nkx2-2P42586 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nkx2-2P42586 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nkx2-2P42586 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx2-2P42586 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms