Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.79□□□□□ -0.52
Slc6a11P31650 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.79□□□□□ -0.52
Slc6a11P31650 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.79□□□□□ -0.52
Slc6a11P31650 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Slc6a11P31650 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Slc6a11P31650 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a11P31650 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm11793-201ENSMUST00000120433 981 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Cts7-204ENSMUST00000225321 1257 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.78□□□□□ -0.52
Slc6a11P31650 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Slc6a11P31650 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a11P31650 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Slc6a11P31650 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Slc6a11P31650 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a11P31650 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm8805-201ENSMUST00000117848 313 ntBASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm27320-201ENSMUST00000184892 109 ntBASIC11.77□□□□□ -0.53
Slc6a11P31650 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.77□□□□□ -0.53
Slc6a11P31650 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm10268-201ENSMUST00000085340 555 ntBASIC11.77□□□□□ -0.53
Slc6a11P31650 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms