Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm21769-201ENSMUST00000211922 111 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1bP25119 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm31256-201ENSMUST00000194705 506 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1bP25119 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Gm23270-201ENSMUST00000104055 131 ntBASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Gm9083-201ENSMUST00000120423 819 ntBASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Gm14381-201ENSMUST00000122105 414 ntBASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.48□□□□□ -0.57
Tnfrsf1bP25119 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms