Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm13342-201ENSMUST00000121055 207 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.56□□□□□ -0.4
PdgfrbP05622 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.56□□□□□ -0.4
PdgfrbP05622 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm17420-201ENSMUST00000164753 153 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm45359-201ENSMUST00000210635 427 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm45878-201ENSMUST00000211839 241 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.56□□□□□ -0.4
PdgfrbP05622 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PdgfrbP05622 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.56□□□□□ -0.4
PdgfrbP05622 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Mir1247-201ENSMUST00000116706 82 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm13392-201ENSMUST00000117708 150 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm28975-201ENSMUST00000186412 686 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm18304-201ENSMUST00000189162 546 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm5244-202ENSMUST00000189517 743 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm43037-201ENSMUST00000196808 250 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.55□□□□□ -0.4
PdgfrbP05622 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PdgfrbP05622 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms