Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ifna1P01572 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ifna1P01572 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm12928-201ENSMUST00000117115 573 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Gm15703-201ENSMUST00000120250 880 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm17208-201ENSMUST00000168388 535 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.44□□□□□ -0.74
Ifna1P01572 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Gm37917-201ENSMUST00000194711 392 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Gm44855-201ENSMUST00000205725 362 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.44□□□□□ -0.74
Ifna1P01572 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.44□□□□□ -0.74
Ifna1P01572 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
Ifna1P01572 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ifna1P01572 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Ifna1P01572 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ifna1P01572 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm24231-201ENSMUST00000104315 133 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm12384-201ENSMUST00000119228 919 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm13123-201ENSMUST00000122173 492 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.43□□□□□ -0.74
Ifna1P01572 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Ifna1P01572 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm26185-201ENSMUST00000157692 266 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm22121-201ENSMUST00000175148 54 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm20949-201ENSMUST00000206478 952 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm18624-201ENSMUST00000220966 658 ntBASIC10.43□□□□□ -0.74
Ifna1P01572 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ifna1P01572 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ifna1P01572 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ifna1P01572 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
Ifna1P01572 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.42□□□□□ -0.74
Ifna1P01572 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ifna1P01572 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ifna1P01572 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ifna1P01572 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ifna1P01572 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms