Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Copb2O55029 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.26□□□□□ -0.13
Copb2O55029 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Copb2O55029 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.25□□□□□ -0.13
Copb2O55029 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Gm19187-201ENSMUST00000206781 892 ntBASIC14.25□□□□□ -0.13
Copb2O55029 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.25□□□□□ -0.13
Copb2O55029 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Copb2O55029 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Copb2O55029 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Gm14760-201ENSMUST00000121831 999 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Gm25732-201ENSMUST00000175168 60 ntBASIC14.24□□□□□ -0.13
Copb2O55029 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Gm43138-201ENSMUST00000199123 708 ntBASIC14.24□□□□□ -0.13
Copb2O55029 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.24□□□□□ -0.13
Copb2O55029 Gm3786-201ENSMUST00000202659 378 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Gm44958-201ENSMUST00000203734 736 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Gm19208-201ENSMUST00000213861 912 ntBASIC14.24□□□□□ -0.13
Copb2O55029 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.24□□□□□ -0.13
Copb2O55029 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Copb2O55029 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.24□□□□□ -0.13
Copb2O55029 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Copb2O55029 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Gm24934-201ENSMUST00000103764 111 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Copb2O55029 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Gm23119-201ENSMUST00000158610 140 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.23□□□□□ -0.13
Copb2O55029 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Gm37666-201ENSMUST00000194110 866 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.23□□□□□ -0.13
Copb2O55029 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Gm26035-201ENSMUST00000083065 308 ntBASIC14.23□□□□□ -0.13
Copb2O55029 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Copb2O55029 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Copb2O55029 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms