Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.92□□□□□ -0.34
Ebf3O08791 Gm37986-201ENSMUST00000193285 383 ntBASIC12.92□□□□□ -0.34
Ebf3O08791 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.92□□□□□ -0.34
Ebf3O08791 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.92□□□□□ -0.34
Ebf3O08791 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.92□□□□□ -0.34
Ebf3O08791 Gzmn-202ENSMUST00000225535 989 ntBASIC12.92□□□□□ -0.34
Ebf3O08791 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ebf3O08791 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf3O08791 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.91□□□□□ -0.34
Ebf3O08791 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Gm16296-201ENSMUST00000159905 325 ntBASIC12.91□□□□□ -0.34
Ebf3O08791 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Ebf3O08791 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ebf3O08791 Gm25732-201ENSMUST00000175168 60 ntBASIC12.91□□□□□ -0.34
Ebf3O08791 Gm42997-202ENSMUST00000200321 985 ntBASIC12.91□□□□□ -0.34
Ebf3O08791 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.91□□□□□ -0.34
Ebf3O08791 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ebf3O08791 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ebf3O08791 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ebf3O08791 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ebf3O08791 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf3O08791 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.91□□□□□ -0.34
Ebf3O08791 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Gm13996-201ENSMUST00000118456 430 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 Gm14999-201ENSMUST00000121039 624 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.9□□□□□ -0.34
Ebf3O08791 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ebf3O08791 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.9□□□□□ -0.34
Ebf3O08791 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms