Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gm12490-201ENSMUST00000120255 560 ntBASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gm10268-201ENSMUST00000085340 555 ntBASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm13315-201ENSMUST00000120376 991 ntBASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm8018-201ENSMUST00000173536 789 ntBASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc112A0AUP1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc112A0AUP1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm16177-201ENSMUST00000120728 718 ntBASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm27682-201ENSMUST00000183930 110 ntBASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm18304-201ENSMUST00000189162 546 ntBASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc112A0AUP1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms