Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Gm8227-201ENSMUST00000223306 571 ntBASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc194A0A140LIT1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Gm43818-201ENSMUST00000200605 466 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Gm6007-201ENSMUST00000208170 823 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Pck2-205ENSMUST00000226352 2784 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc194A0A140LIT1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms