Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm24255-201ENSMUST00000104481 128 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm15236-201ENSMUST00000117309 379 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm37259-201ENSMUST00000193903 849 ntBASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm20482-202ENSMUST00000174729 825 ntBASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Morn2-202ENSMUST00000227729 656 ntBASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Mrpl40Q9Z2Q5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm10434-201ENSMUST00000101158 471 ntBASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mrpl40Q9Z2Q5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms