Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Gm10060-201ENSMUST00000212002 111 ntBASIC9.9□□□□□ -0.82
Smco4Q9JIS3 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.9□□□□□ -0.82
Smco4Q9JIS3 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.9□□□□□ -0.83
Smco4Q9JIS3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Smco4Q9JIS3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm10252-201ENSMUST00000209541 832 ntBASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Smco4Q9JIS3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms