Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc130Q9D516 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm16479-201ENSMUST00000121706 932 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm24644-201ENSMUST00000157114 139 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm27331-201ENSMUST00000183705 60 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm27847-201ENSMUST00000183711 107 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm27375-201ENSMUST00000183799 107 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm6091-201ENSMUST00000098307 165 ntBASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc130Q9D516 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Daam2-202ENSMUST00000224595 1926 ntBASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.52□□□□□ -0.4
Ccdc130Q9D516 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc130Q9D516 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm7561-201ENSMUST00000211203 886 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm29705-201ENSMUST00000212598 474 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm10146-201ENSMUST00000072739 309 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc130Q9D516 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms