Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim33Q99PP7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm5781-201ENSMUST00000219792 443 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.4□□□□□ -0.42
Trim33Q99PP7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim33Q99PP7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim33Q99PP7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim33Q99PP7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim33Q99PP7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim33Q99PP7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim33Q99PP7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm16296-201ENSMUST00000159905 325 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm38002-201ENSMUST00000193255 180 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.39□□□□□ -0.43
Trim33Q99PP7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim33Q99PP7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms