Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm8738-201ENSMUST00000172606 329 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm27516-201ENSMUST00000184237 98 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm38158-201ENSMUST00000194617 339 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm18935-201ENSMUST00000212692 664 ntBASIC12.11□□□□□ -0.47
Msh4Q99MT2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msh4Q99MT2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm12502-201ENSMUST00000120197 444 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm12291-201ENSMUST00000121627 311 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm24548-201ENSMUST00000158650 108 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Mir8109-201ENSMUST00000184375 117 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.1□□□□□ -0.47
Msh4Q99MT2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Msh4Q99MT2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.09□□□□□ -0.47
Msh4Q99MT2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm13786-201ENSMUST00000122371 333 ntBASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Msh4Q99MT2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.09□□□□□ -0.47
Msh4Q99MT2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms