Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Nkd1Q99MH6 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm27892-201ENSMUST00000185017 106 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm19163-201ENSMUST00000223313 780 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.7□□□□□ -0.54
Nkd1Q99MH6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm22331-201ENSMUST00000158066 136 ntBASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm27486-201ENSMUST00000184923 80 ntBASIC11.69□□□□□ -0.54
Nkd1Q99MH6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm4768-201ENSMUST00000206199 686 ntBASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.69□□□□□ -0.54
Nkd1Q99MH6 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkd1Q99MH6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd1Q99MH6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms