Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm16202-201ENSMUST00000117532 544 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm14928-201ENSMUST00000120198 477 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm5354-201ENSMUST00000182417 973 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.52□□□□□ -0.41
Cdk9Q99J95 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cdk9Q99J95 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm11424-201ENSMUST00000121929 829 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm8515-201ENSMUST00000194852 576 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm42599-201ENSMUST00000201308 469 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm45668-201ENSMUST00000211271 493 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm26035-201ENSMUST00000083065 308 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.51□□□□□ -0.41
Cdk9Q99J95 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk9Q99J95 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm14350-201ENSMUST00000116642 640 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm13689-201ENSMUST00000119360 685 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms