Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.19□□□□□ -0.14
Trex1Q91XB0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trex1Q91XB0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm12196-201ENSMUST00000120954 262 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm45770-201ENSMUST00000212105 616 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.18□□□□□ -0.14
Trex1Q91XB0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex1Q91XB0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm4607-201ENSMUST00000206649 577 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.17□□□□□ -0.14
Trex1Q91XB0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex1Q91XB0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms