Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.43□□□□□ -0.42
Vps39Q8R5L3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.43□□□□□ -0.42
Vps39Q8R5L3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm24136-201ENSMUST00000083374 165 ntBASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm40466-201ENSMUST00000212174 422 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm8227-201ENSMUST00000223306 571 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps39Q8R5L3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps39Q8R5L3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms