Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Mir1247-201ENSMUST00000116706 82 ntBASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Gm11597-201ENSMUST00000121423 964 ntBASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Gm27023-201ENSMUST00000182372 285 ntBASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim29Q8R2Q0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm43630-201ENSMUST00000201550 776 ntBASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm24136-201ENSMUST00000083374 165 ntBASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim29Q8R2Q0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm10434-201ENSMUST00000101158 471 ntBASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim29Q8R2Q0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms