Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gm7775-201ENSMUST00000218871 853 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 BC043934-202ENSMUST00000185694 2356 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gm13689-201ENSMUST00000119360 685 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gm9522-201ENSMUST00000182394 926 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Gm8396-201ENSMUST00000057361 823 ntBASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ebf4Q8K4J2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms