Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm18307-201ENSMUST00000206864 949 ntBASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Syt7-204ENSMUST00000223586 1344 ntBASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc28bQ8CEG5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ccdc28bQ8CEG5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm12341-201ENSMUST00000119724 503 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm6152-201ENSMUST00000151704 340 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm18473-201ENSMUST00000220543 868 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc28bQ8CEG5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Gm12151-201ENSMUST00000121374 290 ntBASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms