Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pabpn1Q8CCS6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm23912-201ENSMUST00000104687 87 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm14247-201ENSMUST00000120950 237 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm8197-202ENSMUST00000193422 934 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ighv1-70-201ENSMUST00000196509 351 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm43249-201ENSMUST00000200464 458 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm45113-201ENSMUST00000207518 165 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 CT010506.1-201ENSMUST00000223673 349 ntBASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pabpn1Q8CCS6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Gm14497-201ENSMUST00000119537 580 ntBASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Gm37207-201ENSMUST00000194284 296 ntBASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pabpn1Q8CCS6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pabpn1Q8CCS6 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm8459-201ENSMUST00000162504 760 ntBASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm4895-201ENSMUST00000181646 1137 ntBASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm6518-201ENSMUST00000208450 342 ntBASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm9487-201ENSMUST00000216600 472 ntBASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Gm43807-201ENSMUST00000200678 1781 ntBASIC18.83■□□□□ 0.6
Pabpn1Q8CCS6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms