Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm26083-201ENSMUST00000157904 193 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm24548-201ENSMUST00000158650 108 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm6621-201ENSMUST00000193251 772 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm38158-201ENSMUST00000194617 339 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.05□□□□□ -0.48
SynpoQ8CC35 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SynpoQ8CC35 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Pck2-205ENSMUST00000226352 2784 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm10434-201ENSMUST00000101158 471 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm24526-201ENSMUST00000082921 158 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Paupar-201ENSMUST00000194826 3482 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.04□□□□□ -0.48
SynpoQ8CC35 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SynpoQ8CC35 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm38241-201ENSMUST00000192641 898 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms