Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Gm26361-201ENSMUST00000158868 186 ntBASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Gm45224-201ENSMUST00000208203 414 ntBASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Alx1Q8C8B0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm45186-201ENSMUST00000206874 478 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Alx1Q8C8B0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Alx1Q8C8B0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm14130-201ENSMUST00000118417 987 ntBASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm8913-201ENSMUST00000209491 641 ntBASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.42□□□□□ -0.1
Alx1Q8C8B0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms