Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm5616-201ENSMUST00000165252 384 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm8741-201ENSMUST00000174736 384 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm8365-201ENSMUST00000197334 648 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm1821-202ENSMUST00000227415 750 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm16296-201ENSMUST00000159905 325 ntBASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm39404-201ENSMUST00000216350 313 ntBASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm10076-201ENSMUST00000073238 384 ntBASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptcd1Q8C2E4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Gm23251-201ENSMUST00000103773 110 ntBASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Gm6407-201ENSMUST00000176468 549 ntBASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptcd1Q8C2E4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.29■□□□□ 0.04
Ptcd1Q8C2E4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms