Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm11439-201ENSMUST00000118598 409 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm14208-201ENSMUST00000119645 678 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm24990-201ENSMUST00000157406 323 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm7003-201ENSMUST00000195089 312 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm18212-201ENSMUST00000211678 889 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gm5363-201ENSMUST00000211927 938 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubr7Q8BU04 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 AU022133-201ENSMUST00000200601 873 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubr7Q8BU04 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubr7Q8BU04 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.52□□□□□ -0.41
Ubr7Q8BU04 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubr7Q8BU04 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms