Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Gm15198-201ENSMUST00000117283 177 ntBASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Mir8109-201ENSMUST00000184375 117 ntBASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cpsf4Q8BQZ5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gm16379-201ENSMUST00000161469 348 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gm27501-201ENSMUST00000183599 107 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gm8762-201ENSMUST00000193486 339 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Gm6013-201ENSMUST00000212264 699 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpsf4Q8BQZ5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms