Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm15703-201ENSMUST00000120250 880 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Chchd1-203ENSMUST00000224633 557 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Slc5a7Q8BGY9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm12384-201ENSMUST00000119228 919 ntBASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm44771-201ENSMUST00000206975 626 ntBASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Itm2b-204ENSMUST00000228637 783 ntBASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Slc5a7Q8BGY9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc5a7Q8BGY9 Gm24231-201ENSMUST00000104315 133 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms