Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm11660-201ENSMUST00000120955 412 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm11836-201ENSMUST00000121022 441 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm22877-201ENSMUST00000175451 105 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm44158-201ENSMUST00000203881 505 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trnp1Q80ZI1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm3551-201ENSMUST00000190750 664 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm37458-201ENSMUST00000194055 410 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm5714-201ENSMUST00000197343 566 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm45120-201ENSMUST00000208880 408 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trnp1Q80ZI1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Trnp1Q80ZI1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trnp1Q80ZI1 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.9□□□□□ -0.19
Trnp1Q80ZI1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Gm11801-201ENSMUST00000117807 746 ntBASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.89□□□□□ -0.19
Trnp1Q80ZI1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms