Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh8Q7TSK3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh8Q7TSK3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh8Q7TSK3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Gm18753-201ENSMUST00000201000 566 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdh8Q7TSK3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms