Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Gm45384-201ENSMUST00000210451 277 ntBASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smarcd3Q6P9Z1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smarcd3Q6P9Z1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smarcd3Q6P9Z1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smarcd3Q6P9Z1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smarcd3Q6P9Z1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Gm10146-201ENSMUST00000072739 309 ntBASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Smarcd3Q6P9Z1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Snord83b-201ENSMUST00000104546 94 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Mir1894-201ENSMUST00000122802 81 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm16296-201ENSMUST00000159905 325 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.38□□□□□ -0.59
Smarcd3Q6P9Z1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms