Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scaf8Q6DID3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm11801-201ENSMUST00000117807 746 ntBASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm22138-201ENSMUST00000158748 128 ntBASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm17831-201ENSMUST00000205579 900 ntBASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scaf8Q6DID3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm23085-201ENSMUST00000157849 293 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm37299-201ENSMUST00000193951 826 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm6649-201ENSMUST00000199743 1165 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm43084-201ENSMUST00000200696 947 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm42657-201ENSMUST00000201746 211 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 CT009713.1-201ENSMUST00000224828 853 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scaf8Q6DID3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms