Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm23363-201ENSMUST00000175024 79 ntBASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm14704-201ENSMUST00000120300 874 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm6152-201ENSMUST00000151704 340 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm6736-201ENSMUST00000166583 948 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms