Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim80Q3V061 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm26464-201ENSMUST00000157094 305 ntBASIC12.88□□□□□ -0.35
Trim80Q3V061 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.88□□□□□ -0.35
Trim80Q3V061 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.88□□□□□ -0.35
Trim80Q3V061 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.88□□□□□ -0.35
Trim80Q3V061 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim80Q3V061 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim80Q3V061 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Gm10012-201ENSMUST00000078252 192 ntBASIC12.87□□□□□ -0.35
Trim80Q3V061 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim80Q3V061 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim80Q3V061 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms