Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm8712-201ENSMUST00000221090 701 ntBASIC11.7□□□□□ -0.54
Mmp25Q3U435 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Gm10312-201ENSMUST00000078515 489 ntBASIC11.7□□□□□ -0.54
Mmp25Q3U435 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Mmp25Q3U435 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm24934-201ENSMUST00000103764 111 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm25668-201ENSMUST00000157700 129 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm27046-201ENSMUST00000182160 463 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.69□□□□□ -0.54
Mmp25Q3U435 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Mmp25Q3U435 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Mmp25Q3U435 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.68□□□□□ -0.54
Mmp25Q3U435 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Mmp25Q3U435 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.68□□□□□ -0.54
Mmp25Q3U435 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.68□□□□□ -0.54
Mmp25Q3U435 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Mmp25Q3U435 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms