Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Gm13350-201ENSMUST00000120519 479 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Gm16570-201ENSMUST00000161951 436 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Gm18056-201ENSMUST00000207670 568 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm18061-201ENSMUST00000208350 562 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm18063-201ENSMUST00000208529 568 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm18052-201ENSMUST00000208750 559 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm8598-201ENSMUST00000221184 836 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Mir339-201ENSMUST00000083659 96 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Tff1Q08423 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Tff1Q08423 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.33□□□□□ -0.76
Tff1Q08423 Gm11618-201ENSMUST00000117946 267 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Gm11803-201ENSMUST00000119966 444 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Gm16177-201ENSMUST00000120728 718 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Gm13123-201ENSMUST00000122173 492 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Gm7584-201ENSMUST00000175829 940 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
Tff1Q08423 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Tff1Q08423 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.33□□□□□ -0.76
Tff1Q08423 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Tff1Q08423 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.33□□□□□ -0.76
Tff1Q08423 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.32□□□□□ -0.76
Tff1Q08423 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.32□□□□□ -0.76
Tff1Q08423 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.32□□□□□ -0.76
Tff1Q08423 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tff1Q08423 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms