Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm38092-201ENSMUST00000195600 653 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm6266-201ENSMUST00000203844 806 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm45930-201ENSMUST00000221330 292 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.5□□□□□ -0.41
Pfdn6Q03958 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn6Q03958 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm12502-201ENSMUST00000120197 444 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm5745-201ENSMUST00000183748 313 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm27731-201ENSMUST00000185192 107 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm45784-201ENSMUST00000188360 142 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm18187-201ENSMUST00000196476 984 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.49□□□□□ -0.41
Pfdn6Q03958 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pfdn6Q03958 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms