Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Smarcc1P97496 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smarcc1P97496 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.52■□□□□ 0.08
Smarcc1P97496 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
Smarcc1P97496 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.52■□□□□ 0.08
Smarcc1P97496 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.52■□□□□ 0.08
Smarcc1P97496 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.52■□□□□ 0.08
Smarcc1P97496 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.52■□□□□ 0.08
Smarcc1P97496 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.52■□□□□ 0.08
Smarcc1P97496 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc1P97496 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Smarcc1P97496 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Smarcc1P97496 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.52■□□□□ 0.07
Smarcc1P97496 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.52■□□□□ 0.07
Smarcc1P97496 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Smarcc1P97496 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.52■□□□□ 0.07
Smarcc1P97496 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Smarcc1P97496 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Smarcc1P97496 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc1P97496 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm4726-201ENSMUST00000135604 736 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm6019-201ENSMUST00000148369 736 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm6407-201ENSMUST00000176468 549 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm8343-201ENSMUST00000182705 994 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm34023-201ENSMUST00000195539 217 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.51■□□□□ 0.07
Smarcc1P97496 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc1P97496 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc1P97496 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm22144-201ENSMUST00000157402 102 ntBASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm28324-201ENSMUST00000187913 264 ntBASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm17831-201ENSMUST00000205579 900 ntBASIC15.5■□□□□ 0.07
Smarcc1P97496 Gm4607-201ENSMUST00000206649 577 ntBASIC15.5■□□□□ 0.07
Smarcc1P97496 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.5■□□□□ 0.07
Smarcc1P97496 Snora73b-201ENSMUST00000083419 205 ntBASIC15.5■□□□□ 0.07
Smarcc1P97496 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc1P97496 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms